Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|298172277|gb|HO021869.1|HO021869EST: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAG GAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
genomic: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGgtagcatagc ... tgattttcagGAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
EST:
gi|9565455|gb|BE474964.1|BE474964EST: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAG GAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
genomic: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGgtagcatagc ... tgattttcagGAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
EST:
gi|6227915|gb|AW156577.1|AW156577EST: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAG GAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
genomic: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGgtagcatagc ... tgattttcagGAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
EST:
gi|9984597|gb|BE658705.1|BE658705EST: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAG GAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
genomic: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGgtagcatagc ... tgattttcagGAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
EST:
gi|298172237|gb|HO021829.1|HO021829EST: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAG GAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
genomic: CCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGgtagcatagc ... tgattttcagGAACTGCCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAAGTGTGTGTTGGCTCCATATTTTCCTCCCACTGATCCACTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGgtagcatagcatgcattctaaccgattattattattattattattattgctttgtgtgtgaccagttcacacttcatggcatgccatttttctttaaagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG