Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtttttttaaaaaaatttgttgagttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG

Basic information

species Glycine max
transcript GLYMA20G30970.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G30970.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os07g07709.1 (Oryza sativa), 3'ss of exon 2
gtgtttttttaa---aaaaatttgttgagttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
 ||  ||| |||   ||| ||  | ||      |||    |   |  |  | |  |||   |||| |  ||| |  |       || |||  || | ||| |||||||||||  | | | |||  ||| | ||  |  | |||||||||||||| |||||| | || |||||| |||| || |||||| ||||||||||||||
atgactttgtaaccaaaacataagatggtgatgattttgtgcaaaaccaaaggacttttatgttactagtgagaaagctaacaattattt--ttctctgt-agGGCTGGTGAACTCACTCCTGAGGAGCTTGAGCGCCTCATGACTGTGGTGGCAAACCCTCGCCAGTTCAAGGTCCCTGACTGGTTTCTGAACAGGAAGAAG

upper sequence: GLYMA20G30970.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os07g07719.1 (Oryza sativa), 3'ss of exon 1
gtgtttttttaa---aaaaatttgttgagttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
 ||  ||| |||   ||| ||  | ||      |||    |   |  |  | |  |||    ||| |  ||| |  |       || |  |||| | ||| |||||||||||  | | | |||  ||| | ||  |  | |||||||||||||| |||||| | || |||||| |||| || |||||| ||||||||||||||
atgactttgtaaccaaaacataagatggtgatgattttgtgcaaaaccaaaggacttttattttactagtgagaaagctaacaattat--gtttctctgt-agGGCTGGTGAACTCACTCCTGAGGAGCTTGAGCGCCTCATGACTGTGGTGGCAAACCCTCGCCAGTTCAAGGTCCCTGACTGGTTTCTGAACAGGAAGAAG

upper sequence: GLYMA20G30970.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G178341_T01 (Zea mays), 3'ss of exon 2
gtgtttttttaaaaaaatttgttgagttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
              ||      ||  |||  |   | |    ||  || || | | |||| |  | ||    ||        ||   |   || || |||||| |||||| |||   ||| |||| ||||  |  ||||||| || ||||||||||||||||| |||||| | ||||| |||||  | ||||||||||||
------------gcaagcgctgtgttttcgctctgaggacc-ttatcaggtctctctggtgac-gatgtgcctga-----catgccggcgagtgtg-cagGGCCGGTGAGCTGACGCCTGAAGAGCTGGAGCGCCTGATGACGGTCGTGGCGAACCCTAGGCAGTTCAAGGTGCCGGACTGGTTCCTCAACAGGAAGAAG

upper sequence: GLYMA20G30970.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G130544_T01 (Zea mays), 3'ss of exon 1
gtgtttttttaaaaaaatttgttgag-ttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttt--tgtttgtttgtttgt-cagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
                |   || | | || |  | || |   |||  ||  | | | |||| |   |     |    |||| |  |||||   ||  ||| |||||| || ||| |||   |||  ||| ||||  |  ||||||| || ||||| ||||||||||| |||||| | ||||| |||||  | ||||||||||||
--------------gcaagcgtcgcgctttagctccaaggatattatcagatctctctggtgacgatgtggctgatatgttgtgatgtttcggtgagtgtgcagGGCCGGCGAGCTGACGCCTGATGAGCTGGAGCGCCTGATGACGGTCGTGGCCAACCCTAGGCAGTTCAAGGTGCCGGACTGGTTCCTCAACAGGAAGAAG

upper sequence: GLYMA20G30970.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S242_94V6.1 (Physcomitrella patens), 3'ss of exon 2
gtgtttttttaaaaaaatttgttgagttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtc---agGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
||  ||    |      | | ||   | |  |     ||||| |  |  |   | | | || |  ||  | ||     |||   ||| |||| |||||   ||||| || || |||  ||| || ||| | || |   | |||    | || || || ||| | || ||||||||||||||||||||| ||||||| ||||| 
gtagttaggcatgctggtgtcttagttcctttactttgttgagtgacgcg---tcgcgattttacttatagttcttcttttggctttttttggttgtccccagGGCCGGCGAATTGTCTGCAGCCGAGCTTGAGAACTTAATGGTCATCGTTGCCAATCCTCGCCAGTTCAAGATCCCGGATTGGTTTCTGAACAGAAAGAAA

upper sequence: GLYMA20G30970.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S72_222V6.2 (Physcomitrella patens), 3'ss of exon 2
gtgtttttttaaaaaaatttgt---tgagttca-attgcacgtt---gattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
    |    | |  || | |||   ||||| ||   || |||||     ||   |        ||   ||   |   |||  |  | |  |     |||  | | |||||||| ||| |    || || ||| | || |   |||||    | || || |||||| | |||||||||||||| || ||||| |||||||||||||| 
---ctgagattaggaattctgtgagtgagtccatgatgaacgttttcagttgagagaaaccgatgacaatcactcttattcagcatctcgg---aattgaatat-agGGCTGGCGAGCTCTCCGCAGCTGAGCTCGAGAACCTGATGGTCATCGTTGCTAACCCTCGTCAATTCAAGATCCCAGACTGGTTCTTGAACAGGAAGAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13180750|gb|BG352090.1|BG352090
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7145701|gb|AW507623.1|AW507623
EST:     TTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: TTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|208304777|gb|GE103584.1|GE103584
EST:     GAATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: G-ATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|213593355|gb|DB969929.1|DB969929
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|23727408|gb|BU761733.1|BU761733
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|11688277|gb|BF595953.1|BF595953
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|208085035|gb|GD883599.1|GD883599
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGA
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGA
EST: gi|5126894|gb|AI748630.1|AI748630
EST:     GATTCGCCAACATCGCTTGCAAGAAGGCCGATGCTGACATGAAACACAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGAGGTGG
genomic: GATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAA-CAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGG
EST: gi|209722049|gb|BW672349.1|BW672349
EST:     CGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: CGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254342670|gb|GR858832.1|GR858832
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298187012|gb|HO034161.1|HO034161
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         AGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254329782|gb|GR839335.1|GR839335
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254331723|gb|GR843573.1|GR843573
EST:     GATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: GATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|14011407|gb|BG726329.1|BG726329
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCACAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|16348037|gb|BI973632.1|BI973632
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254347962|gb|GR854211.1|GR854211
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|15287265|gb|BI471156.1|BI471156
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254323772|gb|GR836111.1|GR836111
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192330751|gb|FK022014.1|FK022014
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7590293|gb|AW706049.1|AW706049
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31459312|gb|CD401340.1|CD401340
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|15336869|gb|BI497525.1|BI497525
EST:     ATTCGCCAACATCGCTTGCAAGATTTTTCTTATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCACAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: ATTCGCCAACATCGCTTGCAAGA--AGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7924110|gb|AW830136.1|AW830136
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|8403301|gb|BE058935.1|BE058935
EST:     AGATTCGCCAACATCGCTTGC---AAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254314638|gb|GR829631.1|GR829631
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|213594308|gb|DB973605.1|DB973605
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254329783|gb|GR839336.1|GR839336
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6725875|gb|AW310274.1|AW310274
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAGG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|5058167|gb|AI736643.1|AI736643
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|208208349|gb|GE004280.1|GE004280
EST:     CAAGAAAGGACCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: CAAG-AAGG-CCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193405379|gb|FK371356.1|FK371356
EST:     CGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: CGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254343995|gb|GR857751.1|GR857751
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|38191359|gb|CF920565.1|CF920565
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254331722|gb|GR843572.1|GR843572
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7686417|gb|AW757065.1|AW757065
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|151409580|gb|EV279388.1|EV279388
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6566383|gb|AW234052.1|AW234052
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|151410586|gb|EV280401.1|EV280401
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|15589659|gb|BI674275.1|BI674275
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGTTTTTTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|57575703|gb|CX548678.1|CX548678
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|16996545|gb|BM085917.1|BM085917
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192321081|gb|FK013541.1|FK013541
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACCGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|5510151|gb|AI856535.1|AI856535
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254323771|gb|GR836110.1|GR836110
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193543849|gb|FK503882.1|FK503882
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|214005761|gb|DB990394.1|DB990394
EST:     TCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTAACT-A
genomic: TCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGT-GGTGG
EST: gi|308098756|gb|HO760497.1|HO760497
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7685938|gb|AW756586.1|AW756586
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7146750|gb|AW508672.1|AW508672
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298183575|gb|HO028788.1|HO028788
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|10233595|gb|BE802483.1|BE802483
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|9819309|gb|BE554822.1|BE554822
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGATATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|151409065|gb|EV278873.1|EV278873
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|27427343|gb|CA938863.1|CA938863
EST:     AAGGCCGATGTTGACATGAACAAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGG
genomic: AAGGCCGATGTTGACATGAAC-AAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGG
EST: gi|7458578|gb|AW666028.1|AW666028
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254330968|gb|GR842233.1|GR842233
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6747672|gb|AW318063.1|AW318063
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31561643|gb|CD487481.1|CD487481
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7589259|gb|AW705037.1|AW705037
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31475633|gb|CD417661.1|CD417661
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31470030|gb|CD412058.1|CD412058
EST:     CGCTTGCAAGAAGGCCGATGTCGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTGGGATAGTGTGATGACTGTGGTGGC
genomic: CGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298189776|gb|HO038179.1|HO038179
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31460650|gb|CD402678.1|CD402678
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|8827386|gb|BE211116.1|BE211116
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCACAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254335587|gb|GR847115.1|GR847115
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254338709|gb|GR850020.1|GR850020
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298191148|gb|HO038627.1|HO038627
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|13788176|gb|BG650768.1|BG650768
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|21256122|gb|BQ453010.1|BQ453010
EST:     AGATTCGCCAACATCGCTT-TAATAAGTTCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|19054124|gb|BM732791.1|BM732791
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|14516521|gb|BI095193.1|BI095193
EST:     CGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: CGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|58024189|gb|CX710930.1|CX710930
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192330752|gb|FK022015.1|FK022015
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|208153071|gb|GD949182.1|GD949182
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298193620|gb|HO040268.1|HO040268
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31312383|gb|CD397586.1|CD397586
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGGGCTGTGGTGG
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGAT-GACTGTGGTGG
EST: gi|21887553|gb|BQ740766.1|BQ740766
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|19269128|gb|BM885384.1|BM885384
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254343994|gb|GR857750.1|GR857750
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7146854|gb|AW508776.1|AW508776
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCANAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|5819879|gb|AI988146.1|AI988146
EST:     GAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: GAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7685542|gb|AW756190.1|AW756190
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192299003|gb|FG990359.1|FG990359
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAGgtgttttttt ... tgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG
                                       tttgttt  CT-rich tract
              ttattgttgaaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgtttttttaaaaaaatttgttgagttcaattgcacgttgattcgcatgtttttgtggttattgttgaaattgggtgtttttgtttgtttgtttgtcagGGCTGGTGAGTTGAGTGCTGCAGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAATTCAAGATCCCGGATTGGTTTTTGAACAGGAAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG