1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GAGTTTTATAACATGACCTAGTAACGATTCACCACATCATGCGTGCCACTCCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAGgcaagttatttctctctctctctctctttgcttctccgttttgaacgaaggaacgtgctgtgtgtttggtttgctgagatgtcacgatttgctgcaactt...
species | Glycine max |
transcript | GLYMA20G30820.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAG GTTAATTTGCAATGACTGAACCTTCCAAGGTCATTCACGTTCGAAATGTGGEST: gi|193450856|gb|FK416546.1|FK416546
genomic: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAGgcaagttatt ... gtttttacagGTTAATTTGCAATGACTGAACCTTCCAAGGTCATTCACGTTCGAAATGTGG
EST: CCTCTTTAACTCTCTCATCCTTTT-CTCTTTCCGTGTCACCCTCTTTCAG GTTAATTTGCAATGACTGAAEST: gi|27809194|gb|CB063616.1|CB063616
genomic: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAGgcaagttatt ... gtttttacagGTTAATTTGCAATGACTGAA
EST: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAG GTTAATTTGCAATGACTGAACCTTCCAAGGTCATTCACGTTCGAAATGTGGEST: gi|9203883|gb|BE330107.1|BE330107
genomic: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAGgcaagttatt ... gtttttacagGTTAATTTGCAATGACTGAACCTTCCAAGGTCATTCACGTTCGAAATGTGG
EST: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAG GTTAATTTGCAATGACTGAACCTTCCAAGGTCATTCACGTTCGAAATGTGG
genomic: CCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAGgcaagttatt ... gtttttacagGTTAATTTGCAATGACTGAACCTTCCAAGGTCATTCACGTTCGAAATGTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTTTTATAACATGACCTAGTAACGATTCACCACATCATGCGTGCCACTCCTCTTTAACTCTCTCATCCTTTTTCTCTTTCCGTGTCACCCTCTTTCAGgcaagttatttctctctctctctctctttgcttctccgttttgaacgaaggaacgtgctgtgtgtttggtttgctgagatgtcacgatttgctgcaactt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc