1 5' 3' |
ACTTCCGTTTCTGATTTTCAGTTTGCCAAAGACAGATCAGGACCTGTCTTCTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAGgttttttcactctcaaattttatagttattctttgttaagcactgatttaaggaagtaaaatgaattaagtctctctctctctctctctatatatatata...
species | Glycine max |
transcript | GLYMA20G30710.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAG GATATAAGAAGGAGGATATTGGCATCAATATCAATAAAGATGGTAGTGAGAEST: gi|192311562|gb|FK004831.1|FK004831
genomic: CTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAGgttttttcac ... gcaaatgcagGATATAAGAAGGAGGATATTGGCATCAATATCAATAAAGATGGTAGTGAGA
EST: CTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAG GATATAAGAAGGAGGATATTGGCATCAATATCAATAAAGATGGTAGTGAGA
genomic: CTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAGgttttttcac ... gcaaatgcagGATATAAGAAGGAGGATATTGGCATCAATATCAATAAAGATGGTAGTGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTCCGTTTCTGATTTTCAGTTTGCCAAAGACAGATCAGGACCTGTCTTCTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAGgttttttcactctcaaattttatagttattctttgttaagcactgatttaaggaagtaaaatgaattaagtctctctctctctctctctatatatatata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcactctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc