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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cattccactttgtgctttaccctatctgtcttccttctctttgtttcttgatcactaagcattgaagatggaatttaaaataaagttggtttatttgcagCTTCTCACTCCTCTTAGGTTTCAGTTGTGACAACCTCTAAGTGACAAGAGTGGAACATTCATTCTTTTAGTGGCAATTTGGCTATATATATTAAGTTCTG

Basic information

species Glycine max
transcript GLYMA20G30660.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcttgatcactaagcattgaagatggaatttaaaataaagttggtttatttgcagCTTCTCACTCCTCTTAGGTTTCAGTTGTGACAACCTCTAAGTGACAAGAGTGGAACATTCATTCTTTTAGTGGCAATTTGGCTATATATATTAAGTTCTG
 tcttgat  putative branch site (score: 4)
                                            tttattt  putative PPT
                          aatttaaaataaagtt  TA-rich tract