Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGAAGACGCAGCAACTGTTGCATTGGACGGTTAAGAATTTCTCCGGCAAAGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCTgtgagtttctcttcattaacgttttttcctttttcaacctaaaacattttactgttatttttatggatattgtggttgttttctgattatcaaacgtttg...

Basic information

species Glycine max
transcript GLYMA20G30030.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51337278|gb|CO981144.1|CO981144
EST:     AGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCT                         CTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCAT
genomic: AGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCTgtgagtttct ... tcatgtgcagCTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCAT
EST: gi|22525343|gb|BU084154.1|BU084154
EST:     AGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCT                         CTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCAT
genomic: AGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCTgtgagtttct ... tcatgtgcagCTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCAT
EST: gi|15287013|gb|BI470904.1|BI470904
EST:     AGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCT                         CTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCAT
genomic: AGAAATCTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCATTCTgtgagtttct ... tcatgtgcagCTGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCGATCAAAGCAT