Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6454453|gb|AW185136.1|AW185136EST: TTTTGATGGTGGTACCAAA GAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCC
genomic: TTTTGATGGTGGTACCAAAgtaagttaat ... tctgttatagGAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCC
EST:
gi|10848364|gb|BF070867.1|BF070867EST: AGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGATGGTGGTACCAAA GAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCC
genomic: AGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGATGGTGGTACCAAAgtaagttaat ... tctgttatagGAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGCTAATAAAGTTCTTGGTGAAGAAAATATTGCTACTATGACTAAGAAAGAGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGATGGTGGTACCAAAgtaagttaattgattaatcttatgctgtggatccaatccgttattaattttcagtgttttcctaacttttttttaatatagttcttaacccttttttttatatttgttccattcttgtgtctgttatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG