1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACTACTGATGAAGGCAGCTAGTGATTATGGTGCTTTGACAGCATCAGTGGCAGATTTTCAGTGGAGTCAGAATTTCAAGGAACCTCCTTCAGTTTGGGGGgtatgcttctacattctttttattgttttaagctagtcttgattagatattagttcattctgtttccattaattatgtctcaacttgtgaaccaatttgc...
species | Glycine max |
transcript | GLYMA20G28950.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAGATTTTCAGTGGAGTCAGAATTTCAAGGAACCTCCTTCAGTTTGGGGG GAAATGCTTCGGCCCATTCCTGTAGCTTTGGCATCTTGCACTCGGTTCTTTEST: gi|208293419|gb|GE090327.1|GE090327
genomic: CAGATTTTCAGTGGAGTCAGAATTTCAAGGAACCTCCTTCAGTTTGGGGGgtatgcttct ... ttttcttcagGAAATGCTTCGGCCCATTCCTGTAGCTTTGGCATCTTGCACTCGGTTCTTT
EST: CAGATTTTCAGTGGAGTCAGAATTTCAAGGAACCTCCTTCAGTTTGGGGG GAAATGCTTCGGCCCATTCCTGTAGCTTTGGCATCTTGCACTCGGTTCTTT
genomic: CAGATTTTCAGTGGAGTCAGAATTTCAAGGAACCTCCTTCAGTTTGGGGGgtatgcttct ... ttttcttcagGAAATGCTTCGGCCCATTCCTGTAGCTTTGGCATCTTGCACTCGGTTCTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTACTGATGAAGGCAGCTAGTGATTATGGTGCTTTGACAGCATCAGTGGCAGATTTTCAGTGGAGTCAGAATTTCAAGGAACCTCCTTCAGTTTGGGGGgtatgcttctacattctttttattgttttaagctagtcttgattagatattagttcattctgtttccattaattatgtctcaacttgtgaaccaatttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA