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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAAGGGTGTGGTGGAAAATGCTTCATGGAAAACTGAAACTCAGAATACCGAAGACCATCCCGACCAATCTCTTGCTACAACACCATTACCGCTTTCCAGgtttaatatgctgtgttttggtcagctgagatgataaaattaatgcccattattgatcttggttcattttatgtaacag

Basic information

species Glycine max
transcript GLYMA20G28740.2
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|17401191|gb|BM177973.1|BM177973
EST:     AATCTCTTGCTACAACACCATTACCGCTTTCCAG                         ATCATTGCTTCCATTATCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTT
genomic: AATCTCTTGCTACAACACCATTACCGCTTTCCAGgtttaatatg ... tatgtaacagATCATTGCTTCCATTATCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTT
EST: gi|18040703|gb|BM308997.1|BM308997
EST:     GAAGACCATCCCGACCAATCTCTTGCTACAACACCATTACCGCTTTCCAG                         ATCATTGCTTCCATTATCCTTGTCATCAAAGGGTAAGCCACCAAGATCTTT
genomic: GAAGACCATCCCGACCAATCTCTTGCTACAACACCATTACCGCTTTCCAGgtttaatatg ... tatgtaacagATCATTGCTTCCATTATCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTT
EST: gi|13791270|gb|BG653861.1|BG653861
EST:     GAAGACCATCCCGACCAATCTCTTGCTACAACACCATTACCGCTTTCCAG                         ATCATTGCTTCCATTATCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTT
genomic: GAAGACCATCCCGACCAATCTCTTGCTACAACACCATTACCGCTTTCCAGgtttaatatg ... tatgtaacagATCATTGCTTCCATTATCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTT