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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGCCAATCCCAACTGTTGTTGCCTTTGTGGATCTTGgtgtgttaatcttatatataatatacacattcactttttaaattttttttattagtgcttaataattaatatccgattgatggtttattagtacaatttt...

Basic information

species Glycine max
transcript GLYMA20G28720.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151401977|gb|EV271790.1|EV271790
EST:     GTTGCCAATCCCAACTGTTGTTGCCTTTGTGGATCTTG                         GTTCACCTAGATTACCTCGATGCAGGAGCAAACATAATATTAACAGCATCT
genomic: GTTGCCAATCCCAACTGTTGTTGCCTTTGTGGATCTTGgtgtgttaat ... acgtggacagGTTCACCTAGATTACCTCGATGCAGGAGCAAACATAATATTAACAGCATCT
EST: gi|298178797|gb|HO024532.1|HO024532
EST:     GTTGCCAATCCCAACTGTTGTTGCCTTTGTGGATCTTG                         GTTCACCTAGATTACCTCGATGCAGGAGCAAACATAATATTAACAGCATCT
genomic: GTTGCCAATCCCAACTGTTGTTGCCTTTGTGGATCTTGgtgtgttaat ... acgtggacagGTTCACCTAGATTACCTCGATGCAGGAGCAAACATAATATTAACAGCATCT