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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCAGTTTTTCCCTTTTCTTCTTCTAAGCCTTCACAGAATTTATAGGTGTTGCCTCTTCAAACTGATGGCAGTGTTTGGTTGGCAACCTTGTCCTTTCAGgtgattcctatgatctttctgtcacacacaaacacaaacataaacactgttatgagcactaacaaggttctaaacttgtggcatattccgtgtcttggtttcag

Basic information

species Glycine max
transcript GLYMA20G28500.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208160591|gb|GD958803.1|GD958803
EST:     TGCCTCTTCAAGCTGATGGCAGTGTTTGGTTGGCAACCTTGTCCTTTCAG                         GAAACATAAAAAATAAGCTATGGTGAGTGAGTGAATGAGTGAGTGAGAG
genomic: TGCCTCTTCAAACTGATGGCAGTGTTTGGTTGGCAACCTTGTCCTTTCAGgtgattccta ... ttggtttcagGAAACATAAAAA-TAAGCTATGGTGAGTGAGTGAATGAGTGAGTGAGAG
EST: gi|193332331|gb|FK298649.1|FK298649
EST:     TGCCTCTTCAAACTGATGGCAGTGTTTGGTTGGCAACCTTGTCCTTTCAG                         GAAACATAAAAAATAAGCTATGGTGAGTGAGTGAATGAGTGAGTGAGAGAA
genomic: TGCCTCTTCAAACTGATGGCAGTGTTTGGTTGGCAACCTTGTCCTTTCAGgtgattccta ... ttggtttcagGAAACATAAAAA-TAAGCTATGGTGAGTGAGTGAATGAGTGAGTGAGAGAA