1 5' 3' | 2 5' 3' |
TGTAGAAACTTCTTCAGCTATAAAGCCAGGACATTTGCTCTCAAAATTGAGAGCAGTGACCCCAGATAGAGTCTTGGAATATCAGAAAAAACTAAAGGAGgttagtagtgctggcataatttatttttgcaataaactcttggggtgctattactacttttgtctttcactccacctgttgcattttttaatattttgga...
species | Glycine max |
transcript | GLYMA20G02340.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AATATCAGAAAAAACTAAAGGAG GTTAAGCGATATTTTGAATACGAAGAACCCGATGGAACGATAAATGAGATTEST: gi|193707669|gb|FK646807.1|FK646807
genomic: AATATCAGAAAAAACTAAAGGAGgttagtagtg ... ctggtttcagGTTAAGCGATATTTTGAATACGAAGAACCCGATGGAACGATAAATGAGATT
EST: GAGCAGTGACCCCAGATAGGGTCTTGGAATATCAGAAAAAACTAAAGGAG GTTAAGCGATATTTTGAATACGAAGAACCCGATGGAACGATAAATGAGATT
genomic: GAGCAGTGACCCCAGATAGAGTCTTGGAATATCAGAAAAAACTAAAGGAGgttagtagtg ... ctggtttcagGTTAAGCGATATTTTGAATACGAAGAACCCGATGGAACGATAAATGAGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTAGAAACTTCTTCAGCTATAAAGCCAGGACATTTGCTCTCAAAATTGAGAGCAGTGACCCCAGATAGAGTCTTGGAATATCAGAAAAAACTAAAGGAGgttagtagtgctggcataatttatttttgcaataaactcttggggtgctattactacttttgtctttcactccacctgttgcattttttaatattttgga
- - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccacc