1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACCTGTTAGGGTTGAAGCTGCCCTAATTGCTCATTTTGCCGGTAAACCAAAGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGgtatgagttgcaattttgatttttagcaatataaattacttcgttaattatccccccctcttatctttttcacaattcatttttttttggcaagttttca...
species | Glycine max |
transcript | GLYMA19G36270.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTG GCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTGEST: gi|207843966|gb|GD816055.1|GD816055
genomic: AGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGgtatgagttg ... aatcatttagGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTG
EST: AGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTG GCAAGAAGAGCATTGCGGGCTTTAAAGGGGGCTGGTCAGGTTGAAAATTATEST: gi|207783172|gb|GD757193.1|GD757193
genomic: AGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGgtatgagttg ... aatcatttagGCAAGAAGAGCATTGCGGGCTTTAA-GGGGGCTGGTCAGGTTGAAA-TTAT
EST: AGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTG GCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTG
genomic: AGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGgtatgagttg ... aatcatttagGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTGTTAGGGTTGAAGCTGCCCTAATTGCTCATTTTGCCGGTAAACCAAAGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGgtatgagttgcaattttgatttttagcaatataaattacttcgttaattatccccccctcttatctttttcacaattcatttttttttggcaagttttca
- - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccccccc