1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtatttgcatttcaactattcaagttgttttatcccttctttaatttatatcatcatgaagttatcattggttatatatgtttgatttgcagACATTCCTCCTGGCAAGAAACAACTTGACTGGAACACACGAATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAATCC
species | Glycine max |
transcript | GLYMA19G36090.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCTAGTTTATGAATATATGCCATTAG-ATGCCTGGAAGACCACTTGCATG ACATTCCTCCTGGCAAGAAA-AACTTGACTGGAACACACGAATGAAAATAGEST: gi|151408586|gb|EV278394.1|EV278394
genomic: TCTAGTTTATGAATATATGCCATTAGGATGCCTGGAAGACCACTTGCATGgtatttgcat ... tgatttgcagACATTCCTCCTGGCAAGAAACAACTTGACTGGAACACACGAATGAAAATAG
EST: TCTAGTTTATGAATATATGCCATTAGGATGCCTGGAAGACCACTTGCATG ACATTCCTCCTGGCAAGAAACAACTTGACTGGAACACACGAATGAAAATAG
genomic: TCTAGTTTATGAATATATGCCATTAGGATGCCTGGAAGACCACTTGCATGgtatttgcat ... tgatttgcagACATTCCTCCTGGCAAGAAACAACTTGACTGGAACACACGAATGAAAATAG
tctttaatttatatcatcatgaagttatcattggttatatatgtttgatttgcagACATTCCTCCTGGCAAGAAACAACTTGACTGGAACACACGAATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAATCC
ttatatatgtttgatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatttgcatttcaactattcaagttgttttatcccttctttaatttatatcatcatgaagttatcattggttatatatgtttgatttgcagACATTCCTCCTGGCAAGAAACAACTTGACTGGAACACACGAATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAATCC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG