1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtttctcttatcaatgttctgtaaatgttttttttctggtttgaaaattgcttcactaatatgtggttgaacattaattgcatgccctgcttc...
species | Glycine max |
transcript | GLYMA19G31050.3 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAG CTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATCEST: gi|7589142|gb|AW704922.1|AW704922
genomic: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtt ... actgttgcagCTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
EST: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAG CTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATCEST: gi|8284458|gb|BE022017.1|BE022017
genomic: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtt ... actgttgcagCTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
EST: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAG CTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATCEST: gi|17023172|gb|BM094206.1|BM094206
genomic: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtt ... actgttgcagCTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
EST: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAG CTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATCEST: gi|17021997|gb|BM093031.1|BM093031
genomic: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtt ... actgttgcagCTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
EST: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAG CTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATCEST: gi|298179344|gb|HO027815.1|HO027815
genomic: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtt ... actgttgcagCTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
EST: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAG CTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
genomic: AGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtt ... actgttgcagCTTCTTGAAAGTCAGTTGGAGCCTTTAACCGAGCAACAATTGATGGGCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTACTCAAGgtgagaagtttctcttatcaatgttctgtaaatgttttttttctggtttgaaaattgcttcactaatatgtggttgaacattaattgcatgccctgcttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG