1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAACATTCTCCTGCTTGGTGATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTAAGGCAAAGACAACCTGGGAAGTACTTTTCTGAGATTGCTGCCAGgttagctattacatttttccttgatttcctcctcaattctatctacacacaacataccaaacatgcagagacattagataattctatattccttggattc...
species | Glycine max |
transcript | GLYMA19G10160.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GCACTAAGGCAAAGACAACCTGNGAAGTACTTTTCTGAGATTGCTGCCAG GTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGGEST: gi|14126678|gb|BG791116.1|BG791116
genomic: GCACTAAGGCAAAGACAACCTGGGAAGTACTTTTCTGAGATTGCTGCCAGgttagctatt ... tactatgcagGTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGG
EST: CTTTTCTGAGATTGCTGCCAG GTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGGEST: gi|298167229|gb|HO010668.1|HO010668
genomic: CTTTTCTGAGATTGCTGCCAGgttagctatt ... tactatgcagGTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGG
EST: GCACTAAGGCAAAGACAACCTGGGAAGTACTTTTCTGAGATTGCTGCCAG GTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGG
genomic: GCACTAAGGCAAAGACAACCTGGGAAGTACTTTTCTGAGATTGCTGCCAGgttagctatt ... tactatgcagGTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAACATTCTCCTGCTTGGTGATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTAAGGCAAAGACAACCTGGGAAGTACTTTTCTGAGATTGCTGCCAGgttagctattacatttttccttgatttcctcctcaattctatctacacacaacataccaaacatgcagagacattagataattctatattccttggattc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC