Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|298169519|gb|HO020879.1|HO020879EST: TCCTAGTCCTCTGCAAGATTTCTGTGTGGCAGCCAAAGAAAAAGATGGTG TGTTTGTGAACGGGAAATTTTGCAAGGACCCTAAGCTTGTCAAAGCTGAAG
genomic: TCCTAGTCCTCTGCAAGATTTCTGTGTGGCAGCCAAAGAAAAAGATGGTGgtatgtaaaa ... gtatttgtagTGTTTGTGAACGGGAAATTTTGCAAGGACCCTAAGCTTGTCAAAGCTGAAG
EST:
gi|37994618|gb|CF806294.1|CF806294EST: AGCCAAAGAAAAAGATGGTG TGTTTGTGAACGGGAAATTTTGCAAGGACCCTAAGCTTGTCAAAGCTGAAG
genomic: AGCCAAAGAAAAAGATGGTGgtatgtaaaa ... gtatttgtagTGTTTGTGAACGGGAAATTTTGCAAGGACCCTAAGCTTGTCAAAGCTGAAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTCCTTGTTGCCATCTTGGCTTTGACATCCTCTCTTGTCTCTGCCTATGATCCTAGTCCTCTGCAAGATTTCTGTGTGGCAGCCAAAGAAAAAGATGGTGgtatgtaaaaacattaatccttgtaccattggcatcatatatatagacgttgtctagaattattgtgattgatgatttttattaattaagaccttttgccttgtatttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG