Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|24205865|gb|BU965118.1|BU965118EST: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGT TGACTGCAAAACTCCTA
genomic: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttg ... attttgcagtTGACTGCAGAACTCCTA
EST:
gi|192293982|gb|FG987151.1|FG987151EST: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGT TGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAG
genomic: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttg ... attttgcagtTGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAG
EST:
gi|192310516|gb|FG999539.1|FG999539EST: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGT TGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
genomic: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttg ... attttgcagtTGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
EST:
gi|18039456|gb|BM307750.1|BM307750EST: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGT TGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
genomic: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttg ... attttgcagtTGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
EST:
gi|18039451|gb|BM307745.1|BM307745EST: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGT TGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
genomic: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttg ... attttgcagtTGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
EST:
gi|192302199|gb|FG997279.1|FG997279EST: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGT TGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
genomic: CCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttg ... attttgcagtTGACTGCAGAACTCCTATCTGTGAATGGAAATGTGATAGAAAAATCTAGCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAAAAGCACATAAGTGTCCCAGTTGGCCACTCGTTTTTCGCTTCTTTGGTCCTTGTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGCGTGTTTCAGGtatgattttgtctctgaaaattattgagttgttcatgtaatatcctttttaatgagaggagacttgtatatagtgttggtgttggtgttgaattttagat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT