Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|9899468|gb|BE608436.1|BE608436EST: CTCTCTCATTTTTGTGTCCATTGTAGCCAATGAGGCAAGCTTGGTCCATG AGGCAAATGGGTCATTTCCAATGGTGCCCTTGGTGGAGGCTGGGAAGATGG
genomic: CTCTCTCATTTTTGTGTCCATTTTAGCCAATGAGGCAAGCTTGGTCCATGtgagtcaccc ... tatgattaggAGGCAAATGGGTCATTTCCAATGGTGCCCTTGGTGGAGGCTGGGAAGATGG
EST:
gi|151396822|gb|EV266695.1|EV266695EST: CTCTCTCATTTTTGTGTCCATTTTAGCCAATGAGGCAAGCTTGGTCCATG AGGCAAATGGGTCATTTCCAATGGTGCCCTTGGTGGAGGCTGGGAAGATGG
genomic: CTCTCTCATTTTTGTGTCCATTTTAGCCAATGAGGCAAGCTTGGTCCATGtgagtcaccc ... tatgattaggAGGCAAATGGGTCATTTCCAATGGTGCCCTTGGTGGAGGCTGGGAAGATGG
EST:
gi|193509309|gb|FK468817.1|FK468817EST: ATTTTAGCAAATGAGGCAAGCTTGGTCCATG AGGCAAATGGGTCATTTCCAATGGTGCCCTTGGTGGAGGCTGGGAAGATGG
genomic: ATTTTAGCCAATGAGGCAAGCTTGGTCCATGtgagtcaccc ... tatgattaggAGGCAAATGGGTCATTTCCAATGGTGCCCTTGGTGGAGGCTGGGAAGATGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GACCAACAAACCAACCAACCAACCATGATGCCTGCTCATGGCCTCATCATCTCTCTCATTTTTGTGTCCATTTTAGCCAATGAGGCAAGCTTGGTCCATGtgagtcaccccctcccccccctctcacacacaaaagttttcatttttcaatttgtttcttcgatctagctacttttttttgttaccctctgtgatgtttcctgtgaattttctcttggggagtgatgtaaactgaaaaagattgtttttttttatgattagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT