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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATTTGTTGAATACTGCTTGCTGTTTGTATCTTTGCTTATGGAGGTAAAACGAATGCTAGCAACACTTCCTTCAACAACTTTTTATCAGACTGAAATTTAggtgagacactctaagtatgtgtttgtgtacacgtttggttgtttgaaacttggatttgtaattttaactaaagttgatccaattttaagttaatgtggt...

Basic information

species Glycine max
transcript GLYMA18G11860.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193500789|gb|FK464908.1|FK464908
EST:     CGAATGCTAGCAACGCTTCCTTCAACAACTTTTTATCAGACTGAAATTTA                         GGTTCATATCTGACTTGGATTGATTTTCTCCTCCTTGCTGACATTGGTTCT
genomic: CGAATGCTAGCAACACTTCCTTCAACAACTTTTTATCAGACTGAAATTTAggtgagacac ... gtccattggaGGTTCATATCTGACTTGGATTGATTTTCTCCTCCTTGCTGACATTGGTTCT
EST: gi|193357564|gb|FK321964.1|FK321964
EST:     CTTCCTTCAACAAC-TTTTATCAGACTGAAATTTA                         GGTTCATATCTGACTTGGATTGATTTTCTCCTCCTTGCTGACATTGGTTCT
genomic: CTTCCTTCAACAACTTTTTATCAGACTGAAATTTAggtgagacac ... gtccattggaGGTTCATATCTGACTTGGATTGATTTTCTCCTCCTTGCTGACATTGGTTCT