Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6071894|gb|AW101281.1|AW101281EST: AATTTAAGGAAAACTTTCATCTCAACAGAGGACAACGTCAATGGAGAATA GGCCATGGGATTTAAGTGTCATGGACTTCTGATTCTCCATGTGGACTTTCA
genomic: AATTTAAGGAAAACTTTCATCTCAACAGAGGACAACGTCAATGGAGAATAggtgtgcttt ... tgaattggtaGGCCATGGGATTTAAGTGTCATGGACTTCTGATTCTCCATGTGGACTTTCA
EST:
gi|16342099|gb|BI967694.1|BI967694EST: AATTTAAGGAAAACTTTCATCTCAACAGAGGACAACGTCAATGGAGAATA GGCCATGGGATTTAAGTGTCATGGACTTCTGATTCTCCATGTGGACTTTCA
genomic: AATTTAAGGAAAACTTTCATCTCAACAGAGGACAACGTCAATGGAGAATAggtgtgcttt ... tgaattggtaGGCCATGGGATTTAAGTGTCATGGACTTCTGATTCTCCATGTGGACTTTCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAGCAAGTTACCAAAGCTCGAGGTTTTCCATGTTATTGATATGTCAGATGAATTTAAGGAAAACTTTCATCTCAACAGAGGACAACGTCAATGGAGAATAggtgtgcttttattcttatgctgaatataaatgttattgctattgtcaactgtttggctttcaaaatataagttttatttgattcctacagtaatttggagtgtatgcattttttttgttgttaattctgcgtgttccttttcatcattactcatcatatatgtgtttttgaattggta
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA