Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18848578|gb|BM567742.1|BM567742EST: CATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAA GGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAAC
genomic: CATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAAggtaaagtaa ... tgatgttgcaGGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAAC
EST:
gi|15200084|gb|BI424164.1|BI424164EST: CATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAA GGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAACAC
genomic: CATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAAggtaaagtaa ... tgatgttgcaGGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAACAC
EST:
gi|11688662|gb|BF596338.1|BF596338EST: CTGAACATGAATGAAATGTTGGAGGAAACCAA GGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAACAC
genomic: CTGAACATGAATGAAATGTTGGAGGAAACCAAggtaaagtaa ... tgatgttgcaGGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAACAC
EST:
gi|15201171|gb|BI424730.1|BI424730EST: CATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAA GGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAACAC
genomic: CATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAAggtaaagtaa ... tgatgttgcaGGATTCAAACATTGGTAATTTAGATCTTGGTTCAGACTTCCAAAGCAACAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AACCCACAATTGAGACTGACCAATTGGCTGCTAGGAAGACAAATGTGACTCATGAGATGCAGGGAAAACTGAACATGAATGAAATGTTGGAGGAAACCAAggtaaagtaacagaattctccattcctgtttttgatgcttttgaacatttttctggtttcaattttcagactttcaaagttgacataggatttgatgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA