Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|151399464|gb|EV269335.1|EV269335EST: CGAATTCAACCACTAATTTCGATGACTGAACTCGTAAAGAACACCAAACA GTTTCAAACCATGGGCGAGGACGCCAACTTGAAGAGATGGAAGGAAACAAC
genomic: CGAATTCAACCACTAATTTCGATGACTGAACTCGTAAAGAACACCGAACAggtacgtacg ... cattttcttaGTTTCAAACCATGGGCGAGGACGCCAACTTGAAGAGATGGAGGGAAACAAC
EST:
gi|23725850|gb|BU760895.1|BU760895EST: CGAATTCAACCACTAATTTCGATGACTGAACTCGTAAAGAACACCGAACA GTTTCAAACCTTGGGCGAGGACGCCAACTTGAAGAGATGGAGGGAAACAAC
genomic: CGAATTCAACCACTAATTTCGATGACTGAACTCGTAAAGAACACCGAACAggtacgtacg ... cattttcttaGTTTCAAACCATGGGCGAGGACGCCAACTTGAAGAGATGGAGGGAAACAAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCCATCTCTTAAGTTTCACTGCCAGCAATCTCTCCGGTTCTTTACCTTCACGAATTCAACCACTAATTTCGATGACTGAACTCGTAAAGAACACCGAACAggtacgtacgaatcaattcatggtttcgaattatattgatatgtggttaatatctttttaacttctaattagtattttcattttctta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC