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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggtctgtgcttgataaaagccaagttccaatgcttaagtaattttgtaagtagttaattttttgtaatcatgtgcttttaattgtcagatgttaaattaatatttcaaatgcatatttgcaaaaccaagtatttattgatgttctttaacaattttcagattttttttctcatgagAGTGGAGCAACACACTTTCTGATACATTTCTTCTAACTCATTCTCCATTATTGGTTAAAATTTTGTGGAAA

Basic information

species Glycine max
transcript GLYMA17G35400.1
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaccaagtatttattgatgttctttaacaattttcagattttttttctcatgagAGTGGAGCAACACACTTTCTGATACATTTCTTCTAACTCATTCTCCATTATTGGTTAAAATTTTGTGGAAA
                      ctttaac  putative branch site (score: 3)
                                       ttttttttctcat  putative PPT
        tatttattgatgttct  TA-rich tract