Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6846345|gb|AW348635.1|AW348635EST: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAG TGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
genomic: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAGgtactgtttc ... gatgttgcagTGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
EST:
gi|31456746|gb|CD398774.1|CD398774EST: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAG TGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
genomic: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAGgtactgtttc ... gatgttgcagTGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
EST:
gi|213601687|gb|DB972409.1|DB972409EST: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAG TGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
genomic: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAGgtactgtttc ... gatgttgcagTGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
EST:
gi|192324668|gb|FK016829.1|FK016829EST: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAG TGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
genomic: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAGgtactgtttc ... gatgttgcagTGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
EST:
gi|192319459|gb|FK005899.1|FK005899EST: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAG TGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
genomic: ATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAGgtactgtttc ... gatgttgcagTGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
EST:
gi|21637870|gb|BM108025.1|BM108025EST: TGCAACTCGATCATAGACAG TGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
genomic: TGCAACTCGATCATAGACAGgtactgtttc ... gatgttgcagTGTTGCTTCCCTCCTAACCTATCTGCGCATACATGCAAGCATGGTTACCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGATGGAGTTGTTTTAGATTTTTCAGGATCATATCTTGTGAATGTTGATGATTTTGCATTTGGTCCAGTGGCAAGATACTTGCAACTCGATCATAGACAGgtactgtttctcagattcactatctaaatctcttgttgccttctttcttacagattgttctcattcatgctagcataccattcacaaatgcatgcatgct
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