1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATAAAAGATCAGATATGGCGTACACTTAGGTTCATTGCAGTGTCCTTTTTCATGATTTCTGGTGTAGGAGCACTTATTGAAGATAAAGGAATTAGTAAAGgtattccttgttagtgtaacctgtttgtattctttttttattgaatctgaatttagcagacatgttctttggtttgttttttcatatttcccag
species | Glycine max |
transcript | GLYMA17G34610.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CATGATTTCTGGTGTAGGAGCACTTATTGAAGATAAAGGAATTAGTAAAG GACTTGGTATAAATGAAGAAGAGCAACCTAGCATGGAATCAAGTACEST: gi|193354072|gb|FK320750.1|FK320750
genomic: CATGATTTCTGGTGTAGGAGCACTTATTGAAGATAAAGGAATTAGTAAAGgtattccttg ... tatttcccagGACTTGGTATAAATGAAGAAGTGCAACCTAGCATGGAATCAAGTAC
EST: CATGATTTCTGGTGTAGGAGCACTTATTGAAGATAAAGGAATTAGTAAAG GACTTGGTATAAATGAAGAAGTGCAACCTAGCATGGAATCAAGTACAAAAT
genomic: CATGATTTCTGGTGTAGGAGCACTTATTGAAGATAAAGGAATTAGTAAAGgtattccttg ... tatttcccagGACTTGGTATAAATGAAGAAGTGCAACCTAGCATGGAATCAAGTACAAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAAAGATCAGATATGGCGTACACTTAGGTTCATTGCAGTGTCCTTTTTCATGATTTCTGGTGTAGGAGCACTTATTGAAGATAAAGGAATTAGTAAAGgtattccttgttagtgtaacctgtttgtattctttttttattgaatctgaatttagcagacatgttctttggtttgttttttcatatttcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA