Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|5677665|gb|AI938795.1|AI938795EST: AGCAGCTCCTGATGACTG TTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
genomic: AGCAGCTCCTGATGACTGgtaacaaaca ... tgttttgtagTTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
EST:
gi|214009467|gb|DB990095.1|DB990095EST: CGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTG TTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
genomic: CGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTGgtaacaaaca ... tgttttgtagTTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
EST:
gi|120530409|gb|EH258542.1|EH258542EST: CGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTG TTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
genomic: CGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTGgtaacaaaca ... tgttttgtagTTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
EST:
gi|10231535|gb|BE800423.1|BE800423EST: CGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTG TTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
genomic: CGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTGgtaacaaaca ... tgttttgtagTTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
EST:
gi|5677618|gb|AI938748.1|AI938748EST: GGTTAAAGCAGCTCCTGATGACTG TTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
genomic: GGTTAAAGCAGCTCCTGATGACTGgtaacaaaca ... tgttttgtagTTATGTTCTGGCATCTTACGCTCATTTTCTTTGGGACGCTGAGGAAGAGGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGCTATCGATGTATGCAGATTTGATATGGGAGAGCCAAAAGGATGCTTCGCGTGCTGAGACTTATTTTGATCAAGCGGTTAAAGCAGCTCCTGATGACTGgtaacaaacatcaaactcttggttgttctctttatggttgagattattcattattcatcatatgtttatggcgtgtttggacaccaagtacatgatggat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC