1 5' 3' | 2 5' 3' |
TGAGAAGAACTATGGACTGTTCAAGGCTGATGGAAGTATATCATATGACATTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAGgtaccataaatttcatttgatgctatctttttttgtttaagctcatttggaagttttcacacaccaaacaaaaagagataaaatcaaaccaggatccccc...
species | Glycine max |
transcript | GLYMA17G12180.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAG AATATCAATACTCAAGGTTTATCCCGGTCATACGCGATGGTATTCTTTTTAEST: gi|16343717|gb|BI969312.1|BI969312
genomic: TTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAGgtaccataaa ... cacttggcagAATATCAATACTCAAGGTTTATCCCGGTCATACGCGATGGTATTCTTTTTA
EST: TTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAG AATATCAATACTCAAGGTTTATCCCGGTCATACGCGATGGTATTCTTTTTAEST: gi|254340215|gb|GR858340.1|GR858340
genomic: TTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAGgtaccataaa ... cacttggcagAATATCAATACTCAAGGTTTATCCCGGTCATACGCGATGGTATTCTTTTTA
EST: TTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAG AATATCAATACTCAAGGTTTATCCCGGTCATACGCGATGGTATTCTTTTTA
genomic: TTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAGgtaccataaa ... cacttggcagAATATCAATACTCAAGGTTTATCCCGGTCATACGCGATGGTATTCTTTTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGAAGAACTATGGACTGTTCAAGGCTGATGGAAGTATATCATATGACATTGGTTTTCATGGACTTAATGCTGGACATTCATCTCTGTTATCTCTTAAGgtaccataaatttcatttgatgctatctttttttgtttaagctcatttggaagttttcacacaccaaacaaaaagagataaaatcaaaccaggatccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaacaaaa