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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTTGCTAACGGCAATGGTTTCCTTCTGCATATTTTCGAATTCGCAGACATTTCTTCAATCGAGTGTTTCCAGTGGTATCATCCAAGgtaaaaatcaaaatccaaatccctaaattcctcatttcattttattaatgaaaaattgatgatttgatttaactgcag

Basic information

species Glycine max
transcript GLYMA17G11970.4
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209698437|gb|BW667234.1|BW667234
EST:     GAATTCGCAGACATTTCTTCAATCGAGTGTTTCCAGTGGTATCATCCAAG                         AGGAACGTAGGGGAAGATAAAGAGATGACGATAAAACCTGTTGTTCGTGTT
genomic: GAATTCGCAGACATTTCTTCAATCGAGTGTTTCCAGTGGTATCATCCAAGgtaaaaatca ... ttaactgcagAGGAACGTAGGGGAAGATAAAGAGATGACGATAAAACCTGTTGTTCGTGTT
EST: gi|5058409|gb|AI736941.1|AI736941
EST:     GACATTTCTTCAATCGAGTGTTTCCAGTGGTATCATCCAAG                         AGGAACGTAGGGGAAGATAAAGAGATGACGATAAAACCTGTTGTTCGTGTT
genomic: GACATTTCTTCAATCGAGTGTTTCCAGTGGTATCATCCAAGgtaaaaatca ... ttaactgcagAGGAACGTAGGGGAAGATAAAGAGATGACGATAAAACCTGTTGTTCGTGTT