1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAGCAAAAGAAGAGGTGGTGCTGGTGGTCTAAACAAAGTTTGTGGTGTTTCTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttcttttccctaactaacttagatactctcttaatttcatagtaaaaaacatgaatttttatttatctgaaataaaccactgattaagaaacaaattcttttggaacactataatatgctcaattcag
species | Glycine max |
transcript | GLYMA17G01230.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAEST: gi|15813315|gb|BI785590.1|BI785590
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACATAAAGAAAA
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCTEST: gi|207749107|gb|GD717739.1|GD717739
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCT
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACAEST: gi|208207075|gb|GE006716.1|GE006716
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACA
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACEST: gi|151409070|gb|EV278878.1|EV278878
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATAC
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCTEST: gi|193586598|gb|FK541270.1|FK541270
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCT
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCTEST: gi|192329210|gb|FK020129.1|FK020129
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCT
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACATAAAGEST: gi|17964063|gb|BM270804.1|BM270804
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACATAAAG
EST: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAA ATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCT
genomic: CTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttct ... ctcaattcagATTGTGAGGCAGCTGTGGGCATACATAAAGAAAAACAACCTCCAAGATCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCAAAAGAAGAGGTGGTGCTGGTGGTCTAAACAAAGTTTGTGGTGTTTCTCCTGAACTTCAGGCGGTTGTTGGTGAGCCGGCAATGCCAAGAACTGAAgtagttttcttttccctaactaacttagatactctcttaatttcatagtaaaaaacatgaatttttatttatctgaaataaaccactgattaagaaacaaattcttttggaacactataatatgctcaattcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC