Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|254329122|gb|GR833494.1|GR833494EST: CTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAAC ACCCATGGAGTGCTAAATGCTGTGAGCTGGGGCATATTGATGCCAACGGGT
genomic: CTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAACgtaagcacca ... ttaatttcagACCCATGGAGTGCTAAATGCTGTGAGCTGGGGCATATTGATGCCAACGGGT
EST:
gi|6228016|gb|AW156544.1|AW156544EST: CTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAAC ACCCATGGAGTGCTAAATGCTGTGAGCTGGGGCATATTGATGCCAACGGGT
genomic: CTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAACgtaagcacca ... ttaatttcagACCCATGGAGTGCTAAATGCTGTGAGCTGGGGCATATTGATGCCAACGGGT
EST:
gi|254348416|gb|GR852095.1|GR852095EST: CTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAAC ACCCATGGAGTGCTAAATGCTGTGAGCTGGGGCATATTGATGCCAACGGGT
genomic: CTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAACgtaagcacca ... ttaatttcagACCCATGGAGTGCTAAATGCTGTGAGCTGGGGCATATTGATGCCAACGGGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TAGCCACGAGACTTCCCACCAAAACTCCAAGGAAATCTTGGATCTTCTCTCTGGTTCCTCCACTCAGCCAACCGGAAATTCACGCCAAAGAAGAAGAAACgtaagcaccaattaatcttttcttatgcccgtcttcaaagttaaaatataacacactatgtctctctttgcttcatgcttttcatcataacatacatgac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA