Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|51341222|gb|CO982539.1|CO982539EST: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGT GTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
genomic: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctctt ... ttctttgcagGTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
EST:
gi|192316047|gb|FK007136.1|FK007136EST: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGT GTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
genomic: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctctt ... ttctttgcagGTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
EST:
gi|58024453|gb|CX711194.1|CX711194EST: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGT GTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
genomic: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctctt ... ttctttgcagGTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
EST:
gi|192319114|gb|FK006898.1|FK006898EST: TTTTTCTCCTTTCGGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGT GTTCTTGGTAGTTGCGAACGGACTAACCGTTGGCTACTCCTTAATTCAAGG
genomic: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctctt ... ttctttgcagGTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
EST:
gi|213607704|gb|DB958723.1|DB958723EST: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGT GTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
genomic: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctctt ... ttctttgcagGTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
EST:
gi|192298980|gb|FG990350.1|FG990350EST: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGT GTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
genomic: TTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctctt ... ttctttgcagGTTCTTGGTAGTTGCGAACGGACTAACTGTTGGCTACTCCTTAATTCAAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGGAGTTGTTGCAATTGTTCTTGTGGTGACTGATTCCCAAGTCAAAGAGTTTTTCTCCTTTCAGAAGAAAGCTAAATTTACAGACATGAAGGCTTTAGTgtgagctcttgtttcttcactttcggtctgaaaatggttttcttctctcctaatcctaatataatattctttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA