Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taaccattgtagacttttgtctgcctgtgtttgcatatttttaatcttaggtttactctttattatgtcaattaacactctttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT

Basic information

species Glycine max
transcript GLYMA16G23230.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G23230.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os11g26910.1 (Oryza sativa), 3'ss of exon 1
taaccattgtagacttttgtctgcctg--tgtttgcatat-ttttaatcttag-gtttactctttattatgtca-attaacactctttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
| | |  ||||  | ||| | || |||  ||||    | |  ||||  | ||| | |||||  || ||||  ||  || |     ||   ||||  |    |||||| || |||||| | ||||||||| |  |  ||||||||||||||||||| || || |||||||||||||| |||||||||||||| || |||||||| |
tgaactatgtattccttt-tgtggctgaatgttgatctgtgctttagccatagtgattactgcttcttataccatgtttatttgattctcaaatccc----acagGCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGACATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCT

upper sequence: GLYMA16G23230.1 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os09g36830.1 (Oryza sativa), 3'ss of exon 1
taaccattgtagacttttgtctgcctgtgtttgcatatttttaatcttaggtttactctttattatgtcaattaacactctttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
|      ||      |    || |   ||| | ||| | | |  | ||   |      | ||  | ||| ||||      | |  |  |||    | ||||||||||||||| | ||||||||| | ||  |||| || || |||||||| || || |||||||||||||| ||||| || ||||| || |||||||| |
tgctggatgattgtctcatgcttctgttgtatccatgtatattgttttttatcattcatgtacaaagtcgattagattcatgtgcatgtttgtgtttcagGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCT

upper sequence: GLYMA16G23230.1 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G101446_T01 (Zea mays), 3'ss of exon 1
-taaccattgtagacttttgtctgc-ctgtgtttgcatatttttaatcttaggtttactctttattatgtcaattaacactc-tttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
   ||  || | |  |  | | ||    ||  ||  ||| | | |||  ||   ||| | |||          ||   | || ||||     |   | || |||||||||||||  ||||||||||| | ||  | ||||| || || ||||| || || |||||||||||||| ||||| || || || ||||||||||| |
cacactgtttttgtttgatttttgtatcgtaattatatactgtaaattgtaa--ttattgtttga-gcactgcttctgattcgtttctcccctaattttatagGCTGCAAACTATCTGAACATCAAGGGTCTGCTCGACCTGACCTGTCAGACTGTTGCTGACATGATCAAGGGCAAGACACCAGAAGAGATTCGCAAGACCT

upper sequence: GLYMA16G23230.1 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G032562_T01 (Zea mays), 3'ss of exon 1
taaccattgtagacttt-tgtctgcctgtgtttgcatatttttaatcttagg---tttactctttattatgtca-attaacactcttt-caaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
        | ||| ||  ||| ||  |  |     ||||||| | | | | |   |  |    || |    | | |||   ||| |       | | | |  |||||||||| ||||| || | |||||  | ||  ||||||| || |||||| | || || |||||||||||||| |||||||| ||||| || ||| ||||||
------aggcagaattggtgtttgtattggccattatattttgagtgtcaagaaataaatatattgtaggattatattgtgactgtccatgctactgcattcacagGCTGCAGACTACCTGGAGATCAATGGGCTGCTGGACCTGACCTGCCAGGCCGTCGCGGACATGATCAAGGGGAAGACTCCAGAGGAGATACGCGAGACAT

upper sequence: GLYMA16G23230.1 (Glycine max), 3'ss of exon 1
lower sequence: PP1S9_292V6.1 (Physcomitrella patens), 3'ss of exon 2
-----------------------------------------------------------taaccattgtagacttttgtctgcctgtgtttgca-tatttttaatcttag------gtttactctttattatgtcaattaacactctt-tcaaaatttcctat-------acagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
                                                            | |    |  ||     |  ||   | |  ||||   ||| |      ||      |        ||    ||   | |    ||    ||    |     ||       |||||| || ||||||||||||||||||| |||  ||||| | || |||||||| || || |||||||| ||||| ||||| || ||||| ||  | || || |
gtaagtgatgtgcatgcgaccctgtttgttgcgtgcagggcgggggatggggtgcatcccagcgggggcggaagcgcga-tgatggcgcgtgcaacgtttgtggggcgagagaggagggggtgacttggggtgaggagttgtgctgacgtcggggtggtgaatgatgggaacagGCAGCGAACTACTTGAACATCAAGAACCTGCTGGACTTGACGTGCCAGACGGTGGCGGACATGATAAAGGGGAAGACGCCGGAGGAGATCAGGAAAACGT

upper sequence: GLYMA16G23230.1 (Glycine max), 3'ss of exon 1
lower sequence: PP1S7_342V6.1 (Physcomitrella patens), 3'ss of exon 2
taaccattgtagacttttgtctgcctgtgtttgcatatttttaatcttaggtttac-tctttattatgtcaattaa---cactctttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
     |  | |     | |    | | | ||       |     | ||   |||   || ||  ||  | ||| |     | | ||||  |  ||  |  |||||| || || ||||||||||||||||   | || || || ||||||||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||
--tttagagcacgtcatggctgtcttttcttaatgccctagcgcttttgaatttgtatccttgctacctaaatgaggcttaatgtttctta--tttgtgaacagGCGGCCAATTACTTGAACATCAAGAATTTGTTAGATCTGACTTGCCAGACCGTAGCGGACATGATCAAGGGTAAGACCCCTGAGGAGATCCGTAAGACAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193537087|gb|FK497958.1|FK497958
EST:     GTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTTCTTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGACCAGA
genomic: GTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATT-CT-Ggtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTG-CCAGA
EST: gi|192330640|gb|FK021959.1|FK021959
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|209720451|gb|BW671784.1|BW671784
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|24136290|gb|BU926800.1|BU926800
EST:     ACGCGGATTTCGTCAATGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193350031|gb|FK316629.1|FK316629
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATC
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATC
EST: gi|193600479|gb|FK553824.1|FK553824
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAAACTACTTGAAACATCAAGAGCCTT
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAA-CTACTTGAA-CATCAAGAGCCTT
EST: gi|208324807|gb|GE126011.1|GE126011
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193357528|gb|FK321956.1|FK321956
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193340572|gb|FK307073.1|FK307073
EST:     AACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: AACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208287070|gb|GE089228.1|GE089228
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTTGGACCTTACTTGCCAGAC
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTT-GGACCTTACTTGCCAGAC
EST: gi|298180438|gb|HO021991.1|HO021991
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208163179|gb|GD962833.1|GD962833
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAG
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAG
EST: gi|298164952|gb|HO010949.1|HO010949
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193700982|gb|FK637725.1|FK637725
EST:     ATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|254338373|gb|GR845623.1|GR845623
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|8827972|gb|BE211702.1|BE211702
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|214009839|gb|DB990348.1|DB990348
EST:     GTGGA-TTAGATCAACGTTGATCAGGCCACTCAT-TTCGATCTCAATCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: GTGGATTTCG-TCAACGTTGATCAGGCCACTC-TCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|298170955|gb|HO015931.1|HO015931
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|207717837|gb|GD697309.1|GD697309
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAAGAGCCTTTTGGACCTTACTTGCCAGAC
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAA-GAGCCTTTTGGACCTTACTTGCCAGAC
EST: gi|298175676|gb|HO015195.1|HO015195
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTCGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|213597951|gb|DB958332.1|DB958332
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|10847360|gb|BF070065.1|BF070065
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|13791663|gb|BG654254.1|BG654254
EST:     ACGCGGATTTCGTCAATGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193595310|gb|FK550865.1|FK550865
EST:     ACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|13563113|gb|BG551333.1|BG551333
EST:     ACGCGGATTTCGTCAATGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193419190|gb|FK382742.1|FK382742
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|13563090|gb|BG551310.1|BG551310
EST:     ACGCGGATTTCGTCAATGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|298188655|gb|HO035348.1|HO035348
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193569350|gb|FK527109.1|FK527109
EST:     ACGTGGATTTCGTCAACGTTGNTCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193355571|gb|FK322956.1|FK322956
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTAGACAAAACTACTTGAACATC
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCT-G-CAAA-CTACTTGAACATC
EST: gi|207718777|gb|GD700671.1|GD700671
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|207814152|gb|GD786381.1|GD786381
EST:     CTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: CTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|209719452|gb|BW671783.1|BW671783
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|192334245|gb|FK024050.1|FK024050
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|9204184|gb|BE330408.1|BE330408
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|254338372|gb|GR845622.1|GR845622
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|6913872|gb|AW395402.1|AW395402
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193522296|gb|FK477773.1|FK477773
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTT
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTT
EST: gi|21677987|gb|BQ630338.1|BQ630338
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193351551|gb|FK317981.1|FK317981
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193633492|gb|FK584660.1|FK584660
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208304144|gb|GE103861.1|GE103861
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208220552|gb|GE016694.1|GE016694
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208258466|gb|GE054997.1|GE054997
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|31474605|gb|CD416633.1|CD416633
EST:     CGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: CGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|18692971|gb|BM521819.1|BM521819
EST:     ACGCGGATTTCGTCAATGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208255369|gb|GE054016.1|GE054016
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGA
EST: gi|193607176|gb|FK556991.1|FK556991
EST:     TCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: TCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|298199490|gb|HO042853.1|HO042853
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208065967|gb|GD865192.1|GD865192
EST:     CCACTCTCTTCGTATTCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: CCACTCTCTTCG-A-TCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|213606427|gb|DB976532.1|DB976532
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|192330641|gb|FK021960.1|FK021960
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTTTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|6915118|gb|AW396715.1|AW396715
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|298171869|gb|HO021461.1|HO021461
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|298195419|gb|HO039250.1|HO039250
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACCTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193322614|gb|FK289480.1|FK289480
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|298197883|gb|HO039422.1|HO039422
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193731410|gb|FK663556.1|FK663556
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208035549|gb|GD837699.1|GD837699
EST:     CAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: CAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193704845|gb|FK646589.1|FK646589
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTA
EST: gi|9204187|gb|BE330411.1|BE330411
EST:     ACGTGGATTTCGTCTACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTAGGACCTTACTTGCCATACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|208128432|gb|GD929230.1|GD929230
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|213593304|gb|DB973553.1|DB973553
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193631502|gb|FK583193.1|FK583193
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAG
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAG
EST: gi|4289932|gb|AI441546.1|AI441546
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGG
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGG
EST: gi|193643787|gb|FK588608.1|FK588608
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGA-CATCAAGAGCCTT
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTT
EST: gi|151409445|gb|EV279253.1|EV279253
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|58016952|gb|CX703694.1|CX703694
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|18726780|gb|BM523750.1|BM523750
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|207822578|gb|GD795661.1|GD795661
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|151412205|gb|EV282017.1|EV282017
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193332151|gb|FK299911.1|FK299911
EST:     ATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|8402015|gb|BE057649.1|BE057649
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|6071607|gb|AW100994.1|AW100994
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|193713340|gb|FK654451.1|FK654451
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTT
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTT
EST: gi|207809839|gb|GD781871.1|GD781871
EST:     CGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: CGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTT-CGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
EST: gi|192333956|gb|FK024769.1|FK024769
EST:     ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTG                         GCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA
genomic: ACGTGGATTTCGTCAACGTTGATCAGGCCACTCTCTTCGATCTCATTCTGgtgagggttt ... tcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cttaggtttactctttattatgtcaattaacactctttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT
                        aattaac  putative branch site (score: 2)
                                           tttcctat  putative PPT
             tttattatgtcaatta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taaccattgtagacttttgtctgcctgtgtttgcatatttttaatcttaggtttactctttattatgtcaattaacactctttcaaaatttcctatacagGCTGCAAACTACTTGAACATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAGA
- - - - - - - - ttgtctg
- - - - - - - - - - - -cctgtgt
- - - - - - - - - - - - - - - -tgcatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acactct