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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaaaaaaaacaaaaatcaaaatgaaaaatatttatttatttactgttattcttttctcaaaaccgctaatttttagcatttgctttgaattcagCTAAGGCTAAGCCGCAGGAACCTGAAGTGACTGTGGCGAGTGATGCATTTACGCAATTCAAGCATCTGCTTCTGCCTATTACGGATAGGAATCCCTATCT

Basic information

species Glycine max
transcript GLYMA16G23160.2
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttactgttattcttttctcaaaaccgctaatttttagcatttgctttgaattcagCTAAGGCTAAGCCGCAGGAACCTGAAGTGACTGTGGCGAGTGATGCATTTACGCAATTCAAGCATCTGCTTCTGCCTATTACGGATAGGAATCCCTATCT
                        cgctaat  putative branch site (score: 3)
                                       tttgcttt  putative PPT
                           taatttttagcattt  TA-rich tract