1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATCTTTTATTGGTTAATTTCGTCGGTCAACTGCATGGGTCTCCGCTTCTCCTCTGGCTCGGCACCTCACTCCTCTTCCCTCAACGGCTCTCACTGTTCAGgcaagtcttcaacttttcctcaccctttcaatattctgggcgaaacacgacatgggtcgtttcccttttcatcgaatgcgaattttcccatgatgggttcgattcctctgttttcag
species | Glycine max |
transcript | GLYMA16G22430.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCCTCAACGGCTCTCACTGTTCAG GTTCAGCAAGAACTGGCAGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGAEST: gi|14126312|gb|BG790750.1|BG790750
genomic: CCCTCAACGGCTCTCACTGTTCAGgcaagtcttc ... ctgttttcagGTTCAGCAAGAACTGGCTGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGA
EST: CTCTGGCTCGGCACCTCACTCCTCTTCCCTCAACGGCTCTCACTGTTCAG GTTCAGCAGGGGCTGGCAGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGAEST: gi|15201352|gb|BI424825.1|BI424825
genomic: CTCTGGCTCGGCACCTCACTCCTCTTCCCTCAACGGCTCTCACTGTTCAGgcaagtcttc ... ctgttttcagGTTCAGCAAGAACTGGCTGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGA
EST: CCCTCAACGGCTCTCACTGTTCAG GTTCAGCAAGAACTGGCAGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGA
genomic: CCCTCAACGGCTCTCACTGTTCAGgcaagtcttc ... ctgttttcagGTTCAGCAAGAACTGGCTGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTTTTATTGGTTAATTTCGTCGGTCAACTGCATGGGTCTCCGCTTCTCCTCTGGCTCGGCACCTCACTCCTCTTCCCTCAACGGCTCTCACTGTTCAGgcaagtcttcaacttttcctcaccctttcaatattctgggcgaaacacgacatgggtcgtttcccttttcatcgaatgcgaattttcccatgatgggttcgattcctctgttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC