1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAAAAGGCCCCTTTCGTTGCTACTGCTGAGAAGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTGgtgaatactttttaccctatgtacttttttacttcttactcatattgtatataattgtttataatttattgaacttgttattttgatgtgttag
species | Glycine max |
transcript | GLYMA16G22060.3 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTG GAGGGAAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTCEST: gi|193494636|gb|FK458886.1|FK458886
genomic: AGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTGgtgaatactt ... gatgtgttagGAGGGAAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTC
EST: GAAGAAACAGGAGTATGAAGAAAACTATTTCGGCTTACAATAAGCAATTG GGAGGGAAAGAATTCAGAGGAAGACGAGTCTGGCAAGTCAAAGTCTGAAGT
genomic: GAAGAAACAGGAGTATGA-GAAAACTATTTCGGCTTACAATAAGCAATTGgtgaatactt ... gatgtgttagG-AGGGAAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAAGGCCCCTTTCGTTGCTACTGCTGAGAAGAAGAAACAGGAGTATGAGAAAACTATTTCGGCTTACAATAAGCAATTGgtgaatactttttaccctatgtacttttttacttcttactcatattgtatataattgtttataatttattgaacttgttattttgatgtgttag
- - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA