Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|7924234|gb|AW830260.1|AW830260EST: TACTTGCCTTCACCCTTGGTGTCAAGCAAATGATCTGTTGCTGTAACAAG ATGGATGCCACTACCCCAAAGTACTCTAAGGGCC-GGTATGAAGAAATTGT
genomic: TACTTGCCTTCACCCTTGGTGTCAAGCAAATGATCTGTTGCTGTAACAAGgtataatcct ... ttgttgacagATGGATGCCACTACCCCAAAGTACTCTAAGG-CCAGGTATGAAGAAATTGT
EST:
gi|209712611|gb|BW653744.1|BW653744EST: TACTTGCCTTCACCCTTGGTGTCAAGCAAATGATCTGTTGCTGTAACAAG ATGGATGCCACTACCCCAAAGTACTCTAAGGCCAGGTATGAAGAAATTGTG
genomic: TACTTGCCTTCACCCTTGGTGTCAAGCAAATGATCTGTTGCTGTAACAAGgtataatcct ... ttgttgacagATGGATGCCACTACCCCAAAGTACTCTAAGGCCAGGTATGAAGAAATTGTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGGTTTTGAAGCTGGTATTTCCAAAGATGGACAGACTCGCGAGCATGCTCTACTTGCCTTCACCCTTGGTGTCAAGCAAATGATCTGTTGCTGTAACAAGgtataatcctggtcttagtcataaataccttgctgtatgttaagattatttatttagtagctgttttctaatgatgtaagttgtgaaatttttgttgacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA