1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTGAATGCAGCTGTGGTGGGAAACTTGTCAAAGGGCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTCTGGAGTATGgttagtgtaattagtttgcttattatggacattatccacggacacctaataatgattataagggtaaagtaagacaagtatttacaaaataaggcttaaa...
species | Glycine max |
transcript | GLYMA10G44480.2 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GGCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTCTGGAGTATG GGACTGGATGGACAGTCAGATCCGAATAGTGTGCATGGAGGATGTGAGGTAEST: gi|151395369|gb|EV265240.1|EV265240
genomic: GGCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTCTGGAGTATGgttagtgtaa ... atcttgtcagGGACTGGATGGACAGTCAGATCCGAATAGTGTGCATGGAGGATGTGAGGTA
EST: GCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTTCTGGAGTATG GGACTGGATG-ACAGTCAGATCCGA-TAGTGTGEST: gi|192313358|gb|FK005130.1|FK005130
genomic: GCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTT-CTGGAGTATGgttagtgtaa ... atcttgtcagGGACTGGATGGACAGTCAGATCCGAATAGTGTG
EST: GGCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTCTGGAGTATG GGACTGGATGGACAGTCAGATCCGAATAGTGTGCATGGAGGATGTGAGGTA
genomic: GGCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTCTGGAGTATGgttagtgtaa ... atcttgtcagGGACTGGATGGACAGTCAGATCCGAATAGTGTGCATGGAGGATGTGAGGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGAATGCAGCTGTGGTGGGAAACTTGTCAAAGGGCTATCTGTGAAGCCGATTAAAGGAAATGCAGTGCTTTTCTGGAGTATGgttagtgtaattagtttgcttattatggacattatccacggacacctaataatgattataagggtaaagtaagacaagtatttacaaaataaggcttaaa
- - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA