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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaaaatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA

Basic information

species Glycine max
transcript GLYMA08G19320.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os07g33880.1 (Oryza sativa), 3'ss of exon 1
agtgaattagatttgaa-attgcggaattggttattaggtcgtgtttggtagtacgctgcaaaaatgttaaaatgcttttccttttg-tttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
| | |   | ||||||  ||||   |   |  |   | |||   ||    | |  |        | | | |  |||||||  ||    |||||| || | ||||||||||||| || || |||||||| ||||||||||  ||||||||||||||||||||||| |||||||| || || |||||||||||||| || ||| 
aattatgcacatttgattattgtttataggcctgcgatgtc-cattccacattcagtatttgttaagctgag-tgcttttgtttcaaatttgttttgtatagGTGAACGTTCCCAAGACCAAGAAGACCTACTGCAAGAACAAGGAGTGCAGGAAGCACACCCTTCACAAGGTCACTCAGTACAAGAAGGGTAAGGACAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os07g33898.1 (Oryza sativa), 3'ss of exon 1
------agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaa-aatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
        | |   | ||||||  ||| |   ||| |||| ||| | || |  ||  |   |   ||  | | ||       |||   |  | ||| || || | ||||||||||||| || || |||||||| ||||||||||  ||||||||||||||||||||||| |||||||| || || |||||||||||||| || ||| 
gcttctgattatgcacatttga--ttgtg---ttgtttat-aggcc-tgctatgtgctttccaataaccagtatttgttaaatttgtttcatatttcttatgtatagGTGAACGTTCCCAAGACCAAGAAGACCTACTGCAAGAACAAGGAGTGCAGGAAGCACACCCTTCACAAGGTCACTCAGTACAAGAAGGGTAAGGACAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os07g33860.1 (Oryza sativa), 3'ss of exon 1
------------------------------------------------------agtgaattagatt-tg-aaattgcggaattggttattaggtcgtgtt--tggtagtacgctgcaaaaatgttaa----aatgcttttccttttg-tttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
                                                        ||  | | ||| || | |||      ||| ||||  |   | | |     |   ||  |    |  ||||||    | |||||||  ||    |||||| || | ||||||||||||| || || |||||||| ||||||||||  ||||||||||||||||||||||| |||||||| || || |||||||||||||| || ||| 
gttttaaccattggtttgctgaatgtgtcttcagtgttgaaaaatttggacacatttgcttcaaattatgcacattcgactgttgtttataggcctgcgatgtccattccacattcagtatttgttaagctgactgcttttgtttcaaatttgttttgtatagGTGAACGTTCCCAAGACCAAGAAGACCTACTGCAAGAACAAGGAGTGCAGGAAGCACACCCTTCACAAGGTCACTCAGTACAAGAAGGGTAAGGACAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: LOC_Os07g26740.1 (Oryza sativa), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttg-gtagtacgctg-caaaaatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
  | |  |    ||| || |  || ||| |  | |  |   | |||  |    | |    |   | | ||  | |  |     | || |   |  |    |||||||||| || ||||| |||||||| ||||| ||||  ||||| ||||||||||||||||| |||||||||||||| |||||||| || || |||||| 
--taatctgatattgcaaataaggcattagaaagtgagcactatttatgcttaatgtcatctgtattcttgtagtattgaatatgttatcactgttttttagGTGAACGTGCCAAAAACTAAGAAGACTTACTGTAAGAACAAGGAATGCAGGAAGCACACCCTACACAAGGTTACCCAGTACAAGAAAGGAAAGGATAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G160351_T01 (Zea mays), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaa---aatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
 | || | | |||||    |     | |  |||||  |      ||   |||    |  | |   | | ||          |  |  |||      |    ||||||||||||||||||| |||||||| ||||| ||||  ||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||| 
-gggactaaaatttgttcatatattact--ttatttagcatgacttttcagtttattttatattgattctttgtggatgaattatgctgtacacatttcctagGTGAACGTTCCGAAAACCAAGAAGACCTACTGTAAGAACAAGGAATGCAGGAAGCACACCCTGCACAAGGTTACCCAGTACAAGAAAGGTAAGGATAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G009412_T01 (Zea mays), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttat---taggtcgt-gtttggtagtacgctgcaaaaatgttaaaatgctt----ttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
      |        | || | | | ||| ||||   | |||| |   ||| ||      |||||   ||||  ||   ||    || ||||    |||| |  | ||||||||||||| || || |||||||| ||||||||||  |||||||||| ||||||||| || ||||||||||| || |||||||||||||| |||||| 
------tacagccccatatggagaacttgcttatgctttggtcttcagttgctaaggatatgcaattttgttttaacctttgcaatttctttcacatgttat--atagGTGAACGTTCCTAAGACCAAGAAGACCTACTGCAAGAACAAGGAGTGCAAGAAGCACACTCTCCACAAGGTTACTCAGTACAAGAAGGGTAAGGATAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G125527_T02 (Zea mays), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgc-tgcaaaaatgttaaaa----tgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
  |||     ||  |||| ||     |     |||   |  | | | |   |     || ||   ||||  ||    |||  ||  |||    |||| |  ||||||||||||||| || || |||||||| ||||||||||  || ||||||| ||||||||| || |||||||| || || || |||||||| || |||||| 
--tgaccctcata-gaaagtgttttttattcaattgactgctctctagagatggatatgaaatgttgttttaacatgtgcagtttgtttcacatgttat--acagGTGAACGTTCCTAAGACCAAGAAGACGTACTGCAAGAACAAAGAGTGCAAGAAGCACACACTCCACAAGGTGACTCAGTATAAGAAGGGCAAGGATAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: GRMZM2G103059_T01 (Zea mays), 3'ss of exon 1
-------------------------------------------agtgaattagatttgaaattgcgga--attggttattaggtcgtgtttggtagtacgctgcaaaaatgtta--aaatgcttttcc------ttttgtttgttg-------tgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
                                           |  |  ||  | ||||   | |  |  ||   ||||   |  |  |   | |  || ||   | |  | ||  ||||| | ||        | | |||||||        |  | ||||||||||||| || || |||||||| ||||||||||  || ||||||| |||||||||| | |||||||| || || || |||||||| || |||||||
gtgtgcatcaaacacatacttctagccccatgcccccatgttaaaagtgtttcaattgaccctccaaataataatttatccagatgcctaaagaaagactcttggagatggatatgaaatgttgttttaacatgtgtagtttgtttcacatgttatatagGTGAACGTTCCTAAGACCAAGAAGACGTACTGCAAGAACAAAGAGTGCAAGAAGCACACCGTCCACAAGGTGACTCAGTATAAGAAGGGCAAGGATAGCA

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: AT4G14320.1 (Arabidopsis thaliana), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggta--gtacgctgcaaaaatgttaaaatgcttttccttttg--tttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
      |  ||   |    |   || |   || |  | ||||  ||  |   ||| ||||   |||   ||   ||   |   |||    || ||| |    |||||||| |||||||||| ||||| || ||||||||||  |||||||||| |||||| ||| |||||||||| || || || ||||| |||||||||||| 
----gttctgaagggcgtatttagattcacttctatgatcgtaattaattctgtatgctgttgaaactgtatcttgtggtagttttaaacttggttttctgtagGTGAACATTCCGAAAACTAAGAACACTTACTGCAAGAACAAGGAGTGCAAGAAGCATACCTTGCACAAGGTGACGCAGTATAAGAAAGGTAAAGATAGCC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: AT3G23390.1 (Arabidopsis thaliana), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctg----caaaaatgttaaaatgcttttccttttgtttgttg---tgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
   |  ||  || | ||     |   || ||  || | |     ||   |||    ||       |  |||   | || ||    |||  |||  ||   |    |||||||| |||| || |||||||| || ||||| ||||  ||||| ||||  ||||| ||  |||||||||||||||||||||||||||||||||| ||  
---gttttcaatctaaa----tgatgtttgtattttgattaaccttaaaagtctcttgattttgtatgtgtgtgagtgattcatttttgattttatgaattttgaagGTGAACATTCCAAAGACAAAGAACACTTACTGTAAGAACAAGGAATGCAAAAAGCATACTTTGCACAAGGTTACCCAATACAAGAAGGGTAAAGACAGTC

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: Vv13s0064g00880.t01 (Vitis vinifera), 3'ss of exon 1
-----------agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaaaatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
           ||    ||| | ||    ||       | |||||  ||   | |||   | || | |      |   | ||||   | |  | |            ||||||||||||||| || ||||||||||| ||||| ||||| |||||||| |||||||||||| |||||||||| || |||||||||||||| || |||||| 
ggtgtaaaaagagcctgttatacttcggttttttagtcttgttatctggctttctttttcaatatgttttgttgaatatgaaatatatattgtctc-----------acagGTGAACGTTCCAAAGACAAAGAAGACGTACTGTAAGAGCAAGGAGTGTAGGAAGCACACCTTGCACAAGGTGACACAATACAAGAAGGGCAAGGATAGCT

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: Vv01s0011g02090.t01 (Vitis vinifera), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaaaatgttaaaatgcttttccttttgtttgttgtgaa-----cagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
     |||   |   | | | |    |  | |   | ||    |||| || | |  ||  ||    ||   ||  |  |  ||| |||   |||| |     |||||||| ||||| || |||||||||||||| || ||||| ||||||||||||||||||||  |||||||||| || || ||||||||||||||||||||| 
-----atttcttacaataatacatcttcagattccatgtatattttgttacttctttgtcaatggttttccattttaatgttttggttaaatgtggaatatacagGTGAATGTTCCAAAGACAAAGAAGACATATTGTAAGAGCAAGGAGTGCAGGAAGCACACATTGCACAAGGTGACACAGTACAAGAAGGGTAAAGATAGCT

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: PP1S22_326V6.1 (Physcomitrella patens), 3'ss of exon 1
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaaaatgttaaaatgcttttcct-----tttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
     | ||||| |||| |    |  || || |  |   ||| || |    |||  |         ||    ||  | |  |      |||  ||   |    ||||||||||||||||||| |||||| | | |||     | |||| ||||| |||||||||||| |||||||| ||||| ||||||||||| || |||||  
----tagtagatctgaa-tactagtttttgtgagaactacgtattggactttactttagggtttatttggggtgactctgatggaggcttgcatgggttttctagGTGAACGTTCCGAAAACCAAGAAGTCCTTCTGTCCAGGGAAGGCGTGCAAGAAGCACACCCTCCACAAGGTCACCCAGTACAAGAAGGGAAAGGATAGTT

upper sequence: GLYMA08G19320.2 (Glycine max), 3'ss of exon 1
lower sequence: PP1S2_415V6.1 (Physcomitrella patens), 3'ss of exon 1
-------------------------------------------------------------------------------------------agtgaattagatttgaaattgcggaattggttattag----gtcgtgtttggtagt----acgctgcaaaaatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
                                                                                            |||| || |||  || || ||    |  | | |  |    || || ||||| | |    | | |  |    || | |    |  |     |||  || | ||   ||||||||||||||||||| |||||| | | |||     | |||  ||||| |||||||||||| |||||||| || || ||||||||||| || |||||  
gttagcattccatccattccttctgctccggactcagtgcatttgttagttaggattatttcaaaggtgttacatcttcgatgctgctccttgtgatttggatgggacat-gcaatgtcagctgtgtgaatagttgtttttggcaattgttaggttttactgttgatgatcctcactgaggattgcatgatttgc-tagGTGAACGTTCCGAAAACGAAGAAGTCCTTCTGTCCTGGGAAGTCGTGCAAGAAGCACACCCTCCACAAGGTCACTCAGTACAAGAAGGGAAAGGATAGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19054197|gb|BM732864.1|BM732864
EST:     CTGCTTCTTCCGATTCCGGCACGCCCCCTAT--CCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAG
genomic: CTGCTTCTTCCGATTCCGGCACGCCCCC-ATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAG
EST: gi|31471363|gb|CD413391.1|CD413391
EST:     GTCTGCTTCTTCCGATTCTGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31461770|gb|CD403798.1|CD403798
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31457795|gb|CD399823.1|CD399823
EST:     CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|254326366|gb|GR840958.1|GR840958
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|15815597|gb|BI787872.1|BI787872
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|13788944|gb|BG651535.1|BG651535
EST:     CGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|26269264|gb|CA820327.1|CA820327
EST:     CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31308979|gb|CD394182.1|CD394182
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31307649|gb|CD392852.1|CD392852
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|7685274|gb|AW755922.1|AW755922
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31474474|gb|CD416502.1|CD416502
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACTAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|254338589|gb|GR845732.1|GR845732
EST:     GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|14008668|gb|BG725272.1|BG725272
EST:     AAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|19269863|gb|BM886119.1|BM886119
EST:     CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|9564070|gb|BE473579.1|BE473579
EST:     TCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31312079|gb|CD397282.1|CD397282
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACTAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|22524513|gb|BU083324.1|BU083324
EST:     CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31311679|gb|CD396882.1|CD396882
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|26268703|gb|CA819766.1|CA819766
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|15663653|gb|BI701024.1|BI701024
EST:     CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|17153768|gb|BM143701.1|BM143701
EST:     CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCAAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31471051|gb|CD413079.1|CD413079
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACCAAGTAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|7285050|gb|AW597537.1|AW597537
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31463707|gb|CD405735.1|CD405735
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|19345920|gb|BM890800.1|BM890800
EST:     CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31311894|gb|CD397097.1|CD397097
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|15288119|gb|BI472010.1|BI472010
EST:     AGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|10236886|gb|BE805774.1|BE805774
EST:     AGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|7146687|gb|AW508609.1|AW508609
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|18722699|gb|BM523416.1|BM523416
EST:     TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|254331993|gb|GR843736.1|GR843736
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|24135987|gb|BU926497.1|BU926497
EST:     TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31459567|gb|CD401595.1|CD401595
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|6951600|gb|AW423668.1|AW423668
EST:     CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31463885|gb|CD405913.1|CD405913
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31462350|gb|CD404378.1|CD404378
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|13790331|gb|BG652922.1|BG652922
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31460711|gb|CD402739.1|CD402739
EST:     GAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31473582|gb|CD415595.1|CD415595
EST:     TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|14991663|gb|BI317336.1|BI317336
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|254330746|gb|GR842011.1|GR842011
EST:     GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|298186813|gb|HO037446.1|HO037446
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|7590328|gb|AW706083.1|AW706083
EST:     GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|11687621|gb|BF595297.1|BF595297
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31473523|gb|CD415536.1|CD415536
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|8285703|gb|BE023262.1|BE023262
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|17963474|gb|BM270223.1|BM270223
EST:     TCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31471370|gb|CD413398.1|CD413398
EST:     GTCTGCTTCTTCCGATTCTGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31474896|gb|CD416924.1|CD416924
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|9820429|gb|BE555939.1|BE555939
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31461275|gb|CD403303.1|CD403303
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|192323034|gb|FK016765.1|FK016765
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|15337037|gb|BI497693.1|BI497693
EST:     TCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|17153663|gb|BM143596.1|BM143596
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTACGGCACGCCCCCATCACCATG                         GTGAACGTTCCAAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|18721421|gb|BM523342.1|BM523342
EST:     TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|9565348|gb|BE474857.1|BE474857
EST:     CACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|21285794|gb|BQ473665.1|BQ473665
EST:     CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: CTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|31461926|gb|CD403954.1|CD403954
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|9204858|gb|BE331082.1|BE331082
EST:     GAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|14258760|gb|BG881668.1|BG881668
EST:     AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: AAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|6455083|gb|AW185766.1|AW185766
EST:     TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: TGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: gi|14011150|gb|BG726081.1|BG726081
EST:     GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG                         GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggtagtacgctgcaaaaatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA
                             cttttccttttgtttg  CT-rich tract
              aaaaatgttaaaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
agtgaattagatttgaaattgcggaattggttattaggtcgtgtttggtagtacgctgcaaaaatgttaaaatgcttttccttttgtttgttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAAGATAGCA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - gtgtttg
- - - - - - - - - - - - - - - - - - - - - - - - - - acgctgc