Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|298184840|gb|HO030053.1|HO030053EST: CCACCAACCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAATAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|15286321|gb|BI470212.1|BI470212EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|15285049|gb|BI468940.1|BI468940EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|6747763|gb|AW318219.1|AW318219EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|208202150|gb|GD998305.1|GD998305EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGGAT
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGG-AT
EST:
gi|7590982|gb|AW706724.1|AW706724EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|22521679|gb|BU080490.1|BU080490EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|10846617|gb|BF071391.1|BF071391EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|15285569|gb|BI469460.1|BI469460EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|6134442|gb|AW132835.1|AW132835EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
EST:
gi|298188812|gb|HO035505.1|HO035505EST: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAG GTGAACAAGTATAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
genomic: CCACCACCCGAAAACCCCTAACCGTCTTCGCCATGGCCCCTAAGAAGAAGgtaccattcc ... actgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gagaccaagtttcatgttgtggatttgattatagctttgtatggtactgtggtagGTGAACAAGTACAACGAAAACTGGAAAAAGGAGTGGTTTGGCGCGGGGATATTCTACGAGGGGAGCGAGGAAGTGGAGGTGGACGTGTTCAAGAAGCTGG
atttgat putative branch site (score: 5)
atttgattata TA-rich tract