Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|17153958|gb|BM143891.1|BM143891EST: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAG GAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
genomic: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAGgtaataatca ... aattttgcagGAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
EST:
gi|23057221|gb|BU577896.1|BU577896EST: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAG GAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
genomic: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAGgtaataatca ... aattttgcagGAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
EST:
gi|23064356|gb|BU579129.1|BU579129EST: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAG GAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
genomic: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAGgtaataatca ... aattttgcagGAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
EST:
gi|192314652|gb|FK008482.1|FK008482EST: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAG GAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
genomic: GCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAGgtaataatca ... aattttgcagGAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCCGAGCAACCAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGACTGAACAGACATGGACCATAGTTGCCCAAACTACTGATGATAATCATGCATGGAGAAAGTACGGACAAAAGGAAATCCTAAATTCTCAATTTCCCAGgtaataatcattttccatttttcttgcacagtctttttttttcctactaaggaaagacattcactcgtttaatttgtgcaaaaattgcatcactactcat
- - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA