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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taataatttctatttattttattgtaagtactactatatgccaaaagatagttttgttatggtgataagtcctctaacctataaatttttttctctgtagAAAAATGCTCCTTGGTTATCAGTGCCACAGTTTGGGGACTGGGATCAGAAGGGACAAGTGCCGGACTACTCGCTAGATTTCTCTAAAATTCGGGAAACGA

Basic information

species Glycine max
transcript GLYMA04G39680.2
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agatagttttgttatggtgataagtcctctaacctataaatttttttctctgtagAAAAATGCTCCTTGGTTATCAGTGCCACAGTTTGGGGACTGGGATCAGAAGGGACAAGTGCCGGACTACTCGCTAGATTTCTCTAAAATTCGGGAAACGA
                          ctctaac  putative branch site (score: 2)
                                        tttttttctctgt  putative PPT
                             taacctataaattttt  TA-rich tract