1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGGAAAAGGAACAATATGAATACGATAAAGCTTTGAATGCCGATAGGACGTACCTCAAGTTCAAGAAACGATTGGACGCGTATCCTGAGCAATGTTTTAGgtgtggaaacagatgattatttgatgtggactatagtgttaaacacgtattcgttcctatttgtgtggcttactaacatgtttttcttataatttctgtgtag
species | Glycine max |
transcript | GLYMA04G39660.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TACCTCAAGTTCAAGAAACGATTGGACGCGTATCCTGAGCAATGTTTTAG ATATTCATATGGTGGGAGACCAATTTTAGCTGCAGCTGATAAAATAAACCCEST: gi|13562779|gb|BG550999.1|BG550999
genomic: TACCTCAAGTTCAAGAAACGATTGGACGCGTATCCTGAGCAATGTTTTAGgtgtggaaac ... ttctgtgtagATATTCATATGGTGGGAGACCAATTTTAGCTGCAGCTGATAAAATAAACCC
EST: TACCTCAAGTTCAAGAAACGATTGGACGCGTATCCTGAGCAATGTTTTAG ATATTCATATGGTGGGAGACCAATTTTAGCTGCAGCTGATAAAATAAACCC
genomic: TACCTCAAGTTCAAGAAACGATTGGACGCGTATCCTGAGCAATGTTTTAGgtgtggaaac ... ttctgtgtagATATTCATATGGTGGGAGACCAATTTTAGCTGCAGCTGATAAAATAAACCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAAAAGGAACAATATGAATACGATAAAGCTTTGAATGCCGATAGGACGTACCTCAAGTTCAAGAAACGATTGGACGCGTATCCTGAGCAATGTTTTAGgtgtggaaacagatgattatttgatgtggactatagtgttaaacacgtattcgttcctatttgtgtggcttactaacatgtttttcttataatttctgtgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA