Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6951775|gb|AW423843.1|AW423843EST: CCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAG ATAAGTTTATGTGCTATAGGAATTGAATGACAAGAAGAGGTTAGCTACTAC
genomic: CCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAGgtataatcaa ... cataatgtagATAAGTTTATGTGCTATAGGAATTGAATGACAAGAAGAGGTTAGCTACTAC
EST:
gi|207837063|gb|GD808372.1|GD808372EST: CCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAG ATAAGTTTATGTGCTATAGGAATTGAATGACAAGAAGAGGTTAGCTACTAC
genomic: CCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAGgtataatcaa ... cataatgtagATAAGTTTATGTGCTATAGGAATTGAATGACAAGAAGAGGTTAGCTACTAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGTTCTCTTGGCAGCTACCCTTTTCACCTCTGCAGCTTCCAATTCTTCTGCCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAGgtataatcaaccccttttcttaattttgttactcatgatcttagaatttgagttcggacataactcaatcttacaaaaacccgatttttttgaagtgaga
- - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG