1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GATGTTGGTTCTACGCAGAAGTCTACTGCTGGGTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgtattttctacttgttcagctattggctattcgatcttttatttattttgtggtctagtgtcctgcttgttatgttatgtctgaactgaaacatgataat...
species | Glycine max |
transcript | GLYMA04G08750.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAG GTTGGATAGAGTGGGATGGGGAGAGGATTGAGTTTGATAATGCTCCATCTTEST: gi|207815229|gb|GD786070.1|GD786070
genomic: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgtattttcta ... tggatatcagGTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGATAATGCTCCATCTT
EST: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAG GTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGATAATGCTCCATCTTEST: gi|193688756|gb|FK629679.1|FK629679
genomic: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgtattttcta ... tggatatcagGTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGATAATGCTCCATCTT
EST: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGCGGACTGTCAACAG GTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGATAATGCTCCATCTT
genomic: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgtattttcta ... tggatatcagGTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGATAATGCTCCATCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGTTGGTTCTACGCAGAAGTCTACTGCTGGGTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgtattttctacttgttcagctattggctattcgatcttttatttattttgtggtctagtgtcctgcttgttatgttatgtctgaactgaaacatgataat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA