1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...aataccccttttacttgcatgtagtggttatgagacaaatcgtgtgcagcgcagttagattcttgtgaaagagtctacccctttctcttctttcttgtagATCGTGATGGCGGCGCAGCTAATTCGTGATCGAGTAGAGATGGAGTGCCTAGAGGGAGCTTGGGAGACCCTCGAAGGCAACACGAGGTGCCGATTTCGGG
species | Glycine max |
transcript | GLYMA0023S00200.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
gcagcgcagttagattcttgtgaaagagtctacccctttctcttctttcttgtagATCGTGATGGCGGCGCAGCTAATTCGTGATCGAGTAGAGATGGAGTGCCTAGAGGGAGCTTGGGAGACCCTCGAAGGCAACACGAGGTGCCGATTTCGGG
tctacccctttctctt CT-rich tract
ttagatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aataccccttttacttgcatgtagtggttatgagacaaatcgtgtgcagcgcagttagattcttgtgaaagagtctacccctttctcttctttcttgtagATCGTGATGGCGGCGCAGCTAATTCGTGATCGAGTAGAGATGGAGTGCCTAGAGGGAGCTTGGGAGACCCTCGAAGGCAACACGAGGTGCCGATTTCGGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - ccccttt
- - - - - - - - gcatgta
- - - - - - - - - - - - -ggttatg
- - - - - - - - - - - - - - - - - - - - - -gtgcagc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcttgtg