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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacaggattggagatgtttatggggcggacaatatgagaatttcactggattgcgaggtaaactgaatgtaaatttttttatggattgagttacatgtatttttttttaccctagttccccggttttgaaatcttttatttctttgattctttttctaatttgcagcaccaaagGAGCTCTTCAGAAAAATTATGGAAAACTATTAG

Basic information

species Glycine max
transcript GLYMA0022S00200.1
intron # 9
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ccggttttgaaatcttttatttctttgattctttttctaatttgcagcaccaaagGAGCTCTTCAGAAAAATTATGGAAAACTATTAG
                                  ttctaat  putative branch site (score: 2)
         aaatcttttatttctt  TA-rich tract