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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATACACAGCGAGAGACGTACTGTGCGCAAGAGTGCTGTGAAGATGAGCGGATTCTTTTCGCGCCACTCCAATGTGTATATCTATGTGCCAAACCTGATAGgtaagctgcgtcatatggtgtcacacagatttgaatgtgagctaaatgtatcgcgcggactcggctgtgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP06395
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15692851|gb|BI717156.1|BI717156
EST:     ATTCTTTTCGCGCCACTCCAATGTGTATATCTATGTGCCAAACCTGATAG                         GGTATGCTCGGGTAGCTGCCGCGCTCTACGCGTTCGCGGTTGCATTCACCA
genomic: ATTCTTTTCGCGCCACTCCAATGTGTATATCTATGTGCCAAACCTGATAGgtaagctgcg ... ggctgtgcagGGTATGCTCGGGTAGCTGCCGCGCTCTACGCGTTCGCGGTTGCATTCACCA
EST: gi|15692229|gb|BI716534.1|BI716534
EST:     ATTCTTTTCGCGCCACTCCAATGTGTATATCTATGTGCCAAACCTGATAG                         GGTATGCTCGGGTAGCTGCCGCGCTCTACGCGTTCGCGGTTGCATTCACCA
genomic: ATTCTTTTCGCGCCACTCCAATGTGTATATCTATGTGCCAAACCTGATAGgtaagctgcg ... ggctgtgcagGGTATGCTCGGGTAGCTGCCGCGCTCTACGCGTTCGCGGTTGCATTCACCA