1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...cgcaactccgcgctgtccggagtctcacttactgcggggctggactaaacctctccccccgcccccatcacccccgccccaccaccctgacgctccacagCTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGCCTGAGCGACTTCATTGAGCGCGGCCGCGTGGGCCTGTCCTCCATCGTGT
species | Chlamydomonas reinhardtii |
transcript | EDP06326 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAG CTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGCEST: gi|49466207|gb|BP094120.1|BP094120
genomic: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAGgtgcgcggcg ... cgctccacagCTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGC
EST: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAG CTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCEST: gi|10784975|gb|AV641647.1|AV641647
genomic: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAGgtgcgcggcg ... cgctccacagCTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCC
EST: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAG CTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGCEST: gi|6550559|gb|AV396343.1|AV396343
genomic: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAGgtgcgcggcg ... cgctccacagCTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGC
EST: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAG CTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGC
genomic: CGGGCCTGCGCCCCGTGGTCATCTATGGTGGCGCCCCCGCGCCCAACCAGgtgcgcggcg ... cgctccacagCTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cgcaactccgcgctgtccggagtctcacttactgcggggctggactaaacctctccccccgcccccatcacccccgccccaccaccctgacgctccacagCTGCGTGACCTGGAGCGCGGCTGCGACATCCTGGTCGCCACGCCCGGCCGCCTGAGCGACTTCATTGAGCGCGGCCGCGTGGGCCTGTCCTCCATCGTGT
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