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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgtcgaggcatgaggaaagggcgtgccggggatgggggaggggggaagagaaaggagcggcagggtggtaaggggatccgtgtcgggggtctgttttgctctgcacacgcttccgggcctgacaactgaactgacagttcctgcctctgcctttgctcccccacagACAAGGCGTGCAAGGCGACGATCGCCGCCTCGACCTTCGGTAACGTCAGCAAGGCTGGCAGCACGTTCTTTGATGACGAGTTCTCTGTGGGCAAGGTCCG

Basic information

species Chlamydomonas reinhardtii
transcript EDP05694
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tccgggcctgacaactgaactgacagttcctgcctctgcctttgctcccccacagACAAGGCGTGCAAGGCGACGATCGCCGCCTCGACCTTCGGTAACGTCAGCAAGGCTGGCAGCACGTTCTTTGATGACGAGTTCTCTGTGGGCAAGGTCCG
                 aactgac  putative branch site (score: 2)
                          ttcctgcctctgcctt  putative PPT